YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52786383, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQKGFTLLE SLTVLMIGSI MFSLLFALLP PIYEKRIVQH FVSQLEEDLL YAQQTALVRH  60
   61 TTVKVQFDFA GCRYIMKHSD EGSSPELVRT YSCNIAIKKS TLKPILTFNP SGVPNQGGKI 120
  121 VIDTQHASFI LTIYLGSGKI NVQKK

Type	Start	End	Confidence
Cytoplasmic	1	10	0.59
Transmembrane Helix	11	33	0.85
Non-Cytoplasmic	34	145	0.70