YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52004210, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHVMKWISN FLYVIIFTII IAAVIVVIST KSSGGEPQLF GYQLKTVLSG SMEPEFKTGS  60
   61 VIAVQKVENP GSLKKGDIIT FMQDENTMVT HRIIGITKNK SNLMFKTKGD NNQNPDSDPV 120
  121 LAENVVAKYS GITVPYAGYL LDFASKPIGT AILLIVPGLL LILYAVITVS AALREIDQKA 180
  181 KAIEAAGKDQ SVSM

Type	Start	End	Confidence
Cytoplasmic	1	9	0.88
Transmembrane Helix	10	30	0.94
Non-Cytoplasmic	31	147	0.97
Transmembrane Helix	148	171	0.87
Cytoplasmic	172	194	0.92