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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52004036, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFWKSVVGK LWFTILLLVS FVLFILTFFL LEFIENYHVD EAEADLTKLA SKVAVIMENH  60
   61 KDQETARSIT WELADELTSI AVIKNENEYW YSPREHQKVA SITLKDIKND PDLNEALRKH 120
  121 QKVQKRTVIS NQKNDQLIVG VPYGKGEDEG MVFLSQSLLA VKDTTQHTTR YILFAAAIAI 180
  181 VLTTIFAFFL SSRITYPLRK MRQGAQDLAK GKFDTKIPIL TQDEIGELAI AFNQMGRQLK 240
  241 FHITALNQEK EHLSNILSSM ADGVITINID GTILVTNPPA ERFLQAWYYE QNMNVKEGHE 300
  301 LPPEARELFQ NTVSTEKEQM IEMTLQGRTW VLLMSPLYNQ SHVRGAVAVL RDMTEERRLD 360
  361 KLRKDFIANV SHELRTPISM LQGYSEAIVD DIASSEEEKK EIAQVIYDES LRMGRLVNDL 420
  421 LDLARMEAGH ISLNVEPVEL REFFERVFRK FYGVAGDKNI TLSHNLDLHE AKFVFDPDKM 480
  481 EQVLTNLIDN AIRHTNAGGT VHVDVQSAES GLKIAVKDSG SGIPEEDLPF IFERFYKADK 540
  541 ARTRGKGGTG LGLAIVKNIV DAHNGSITVH SMLNEGTSFT FYIPRNKQDD GQI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle