YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52348690, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLRHQNFL FAIAWLSGLA LFVNAPGSEA SEWIEPIKGE ITDQFGTRGG KHKGLDIAAP  60
   61 EGEAVAAAAD GTISKSYQSD SYGQVIFIKH DNGYETVYAH LSKRLKKEKE RVKKGEQIGI 120
  121 IGITGISTGT HLHFEMHHGS WTEDKRYAIN PLTVLREEAF RQNSIHVHQN AGTMSGAVTV 180
  181 QKGDTLWRIS KDSGISIEEI MRINGLKHSN LKAGQTLRLH DDESKTGTYV VRKGDTLHHI 240
  241 AEKMGVTVQR LKEWNDLKGE RIYPRQMLEI RENS

Type	Start	End	Confidence
Signal Peptide	1	30	0.98
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	274	0.99