YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52080444, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEQILWVIL PYIVITIFIG GHIYRYQHDQ FGWTAKSSEM LEKKKLALGS SLFHWGIFFV  60
   61 IGGHVMGILI PESLYEALGV SEHMYHKIAI GFGLPAGIAA LSGLLILTYR RFTDKRIRKT 120
  121 SSAGDLITLV ALLFVMTTGL AATFLNIDSK GFDYRTTIGP WFRNIFLFKP DAGLMASVPL 180
  181 WFKLHIIMGY VIFIVWPFTR LVHVFSMPLK YLTRSYVVYR KRAPRKSM

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.84
Transmembrane Helix	7	26	0.94
Cytoplasmic	27	45	0.97
Transmembrane Helix	46	68	0.91
Non-Cytoplasmic	69	87	0.87
Transmembrane Helix	88	109	0.93
Cytoplasmic	110	125	0.85
Transmembrane Helix	126	145	0.94
Non-Cytoplasmic	146	181	0.93
Transmembrane Helix	182	204	0.84
Cytoplasmic	205	228	0.93