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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52785493, gi|...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVSNVTVRK RLIFVLLFGV IIFLIIDTRL GYVQFVLGDK LTTLAKDSWS RNLPFEPERG  60
   61 EILDRNGVKL ATNQSAPSVL VVPKQVENPI KTSRLLASVL NMSEEKAYKH VTKKTSIERI 120
  121 NPEGRKISHE KAKEVRDLNL KGVYIAEDSI RHYPFGSYLS HVLGFAGIDN QGLLGLEAFY 180
  181 DKELKGEKGY VKFYSDAKGK RMPGEADDYT PPKDGLDMKL TIDSKVQTIM EREFDIAEAK 240
  241 YNPDGMVGVA MNPKNGEILA MVSRPDFDPA NYQSIDPKVY NRNLPVWSTY EPGSTFKIIT 300
  301 LAAALEENKV NLQKDQFYDK GSVEVDGARL KCWKRGGHGA QSFLEVVQNS CNPGFVELGQ 360
  361 RLGKEKLFTY IKSFGFGQKT GIDLQGEGTG ILFPLDRVGP VEQATTAFGQ GVSVTPIQQV 420
  421 TAVSAAVNGG TLYTPYIAKE WIDPVTKQTV KKQTPIAKRK VISEETSKQI RYALESVVAQ 480
  481 GTGRNAFVDG YRVGGKTGTA QKVKDGKYLK NNHIVSFIGT APSDDPSIVV YVAVDNPKGT 540
  541 IQFGGTVAAP IVGNIMRDSL PQLGVKKRKD QIEREYQWLD KKLIEVPNLI GLSVTELEPL 600
  601 LINLRLKASG EGDVVVQQSP KPGEKVKEGS TIRIYLDSDD GASD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle