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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52079498, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKRFFIPII ITAAIFLLSL IGYITILFLG DYVIDEKKLI FHASSKIVDH NGEEVASLYT  60
   61 ENRRPVSIAE VPDNVKNAFI AVEDKRFYEH HGIDFKSVSR AVYKDILAGG KVEGGSTITQ 120
  121 QLAKNTFLTN DKTFLRKTKE VIIAINLERD YSKDKLLEMY LNQLYFGHGV YGIQAAANYF 180
  181 FNKDVKDLTV SEGAVLASIP KAPSTYSPIL NPEKSRERRN VILGMMNEQG YISSKETVRA 240
  241 QGSTLGLHVK EKSKNPWLDS YIDLVMKEAE DKYSISSEQL LQGGYTISVP LDVSIQKAAY 300
  301 TLMKQDGYFP GTDNKAEGSA VFIDNRTGGV VAALGGREYA PKGYNRATAQ RQPGSTFKPL 360
  361 AVYGPALEEK LFKPYSMLED KQLSYGGYSP KNYDGQYAGK VSMVDALTYS KNAPAVWTLN 420
  421 EIGIETVKPY LSRMGMNVPD EGLALGLGGL EKGVSPLELA GAYRTFANSG QYTEPFFIKK 480
  481 ITDENGDVMF RHEEKSEKVF SKQTAWNMTR MLEEVVKSGT GKAGDFSGEI AGKTGSTTYT 540
  541 GKEGGTKDAW FAGYTPEVTG AVWMGYDKTD ESHYLKGGSA YPTRLFKDIL KRTNHKPERF 600
  601 KAPEGVKDLD RPIRLEDLES VKADYSFTPM GLITVSLKWH EQEDKRVEYR IYERKNGKET 660
  661 LIDTVKGKGS FSIPYANIFS DASYKIVPYN PQTKTEGKGT DYVEPKVFPS GH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle