YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52347128, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKRICAICC GFLLTLAFSG NAEAISNKAI HWGFSKSKNH QPADAGQELT NLLQQYDAFY  60
   61 LGNTKEKTIY LTFDNGYENG YTPQVLDVLK KQNVKAAFFV TGHFVKDQPE LIKRMAEEGH 120
  121 IIGNHSYHHP DLTTKTSRVI QEELESVDEE VYKITGEKNN LYLRPPRGIF SERVLEETKK 180
  181 LGYQTVFWSV AFVDWKINAQ KGWRYAYDNM MKQAHPGAIY LLHTVSRDNA EALDQAITDL 240
  241 KKEGYTFKSL DDLMFEKSMM LETL

Type	Start	End	Confidence
Signal Peptide	1	24	0.96
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	264	0.99