YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52002371, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWHIETETL LKLGIATLIG MVIGLERELK NKPLGLKTCI VIAISSCVLT MISIDAAYHF  60
   61 PRSNRIMMDP LRLPAQIISG IGFIGAGVIL RKSNDVISGL TTSAMIWGAA GLGVAIGAGF 120
  121 YKEAFVSLIF ILISVEFLPW IVGKIGPNRL QEKEIRVRMS LNDKDKLTDI LKEMKAKKIR 180
  181 IHSVRIDDMR DNEFPIMETK IMVHKKRYVT DVYYDIKAID GVVGVKCDTL

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.51
Transmembrane Helix	8	25	0.54
Cytoplasmic	26	33	0.88
Transmembrane Helix	34	58	0.85
Non-Cytoplasmic	59	71	0.86
Transmembrane Helix	72	90	0.94
Cytoplasmic	91	98	0.76
Transmembrane Helix	99	119	0.93
Non-Cytoplasmic	120	124	0.76
Transmembrane Helix	125	146	0.87
Cytoplasmic	147	230	0.95