YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52079126, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPLLGVIMG STSDWETMKH ACGILDELGI PFEKKVVSAH RTPDLMFEYA EKARERGLKV  60
   61 IIAGAGGAAH LPGMVAAKTT LPVIGVPVQS KALNGLDSLL SIVQMPGGVP VATVAIGKAG 120
  121 AVNAGLLAAQ ILSAFDKELA ERLDERRESI RQTVLESSDQ LV

Type	Start	End	Confidence
Cytoplasmic	1	56	0.73
Transmembrane Helix	57	77	0.64
Non-Cytoplasmic	78	113	0.81
Transmembrane Helix	114	132	0.52
Cytoplasmic	133	162	0.63