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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52081856, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDMDGQKEA TLQISGMTCA ACAARIEKGL KRLDGVQDAN VNLALEKSKI VYDPGQIEVG  60
   61 QLAEKVESLG YQVPAEKAEF AVSGMTCAAC ANRVEKRLNK LSGVKSAAVN FAIETATVDY 120
  121 HAGAVSPEEM IEAVEKLGYK LELKKDRTAD GRAEQREKDI QRQTGKFIFS AILSFPLLWA 180
  181 MVSHFKFTSF IWLPGMFMDP WVQFALATPV QFIVGKQFYT GAYKALRNKS ANMDVLVALG 240
  241 TSAAYFYSLY LSIESLGTNR HPDGLYYETS AILLTLIILG KLFEAKAKGR SSEAIKKLMG 300
  301 LQAKTATVVR NGEEMTVPIE NVLAGDIMYV KPGEKVPADG EIVEGRSALD ESMITGESIP 360
  361 VDKTVGDPVI GATINKNGFL KVRAEKVGKD TALAQIIKVV EEAQGSKAPI QRLADRISGV 420
  421 FVPIVVAIAA ITFFIWYLAV SPGEFGTALE KLIAVLVIAC PCALGLATPT SIMAGSGRAA 480
  481 EFGILFKGGE HLETAHRLET IVLDKTGTVT NGKPQLTDVR PEPWIDETSF LKLIGAAEKS 540
  541 SEHPLAEAIV EGIKEKGIEP ASADSFEAIP GYGIEAAVNE KRILIGTRRL MENRDIDIQD 600
  601 ANGEMEELET QGKTAMLAAV DGRFAGLIAV ADTIKDTSKA AVKRLHDMGL EVVMITGDNR 660
  661 RTAEAIAAEA GIHHVIAEVL PEGKADEVKK IQAKGKKVAM VGDGINDAPA LAAADTGMAI 720
  721 GTGTDVAMEA ADVTLIRGDL NSIADAILMS RLTIKNIKQN LFWAFAYNSI GIPFAAVGLL 780
  781 APWIAGAAMA FSSVSVVLNA LRLQKVKLDW RNPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle