YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108778439, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFKVSLTQT GNGKEFIVKK WLCAASLGLA LAASASVQAA DKIAIVNVSS IFQQLPAREA  60
   61 VAKQLENEFK GRATELQGME RDLQTKMQKL QRDGSTMKAS DRTKLENEVM KQRETFSTKA 120
  121 QAFEQDNRRR QAEERNKILS RIQDAVKSVA TKGGYDVVID ANAVAYADSS KDITADVLKQ 180
  181 VK

Type	Start	End	Confidence
Signal Peptide	1	39	0.99
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	182	0.99