YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|186699261, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYKKYNSSW EGYMGDVLNG NVGINQLKPQ HEYFDAIGLG KVLSENTQYH AVLTLAEAKS  60
   61 IIEDINPPRT QSPSNGEALA RGFEIGNKVT NPVARVFSVT DPISAYAGNI YDSRGVYDVI 120
  121 REFKRFSITA TEYVGENGRK YIHISGYAGL RRIITGTRYG ASHPQMLSMG IGQQGLSSNI 180
  181 VKGLKFCILF SIGYRTIEGI FKDEYTLAEF IGNITMDMAK IAIVAATSFI VGVLFTATVL 240
  241 AGGSIIVVAG VAFAVGFVAT AILDHFDEKY GISEKLIALL TKEMRKKPRT QEANFQSILN 300
  301 GLGRLK

Type	Start	End	Confidence
Cytoplasmic	1	218	0.92
Transmembrane Helix	219	240	0.84
Non-Cytoplasmic	241	244	0.60
Transmembrane Helix	245	266	0.85
Cytoplasmic	267	306	0.85