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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51596963, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPEIGSFLL CLALAISLLL SLYPQWGAAR QDARMMAVGR PLTYGMFAAI TLSFICLIYA  60
   61 FVVNDFTVSY VAANSNSYLP IYYRIAASWG AHEGSLLLWV LLLSCWSLAV ALFSRSMPED 120
  121 AVARVLSVLG MITGGFLLFI ILTSNPFSRT LPDFPIDGRD LNPLLQDVGL IFHPPLLYMG 180
  181 YVGFSVAFAF AIASLMAGRL DSAWARWSRP WTQAAWVFLT LGIVLGSAWA YYELGWGGWW 240
  241 FWDPVENASF MPWLAGTALI HSLAVTEKRG TFKAWTVLLA ITAFSLCLMG TFLVRSGVLV 300
  301 SVHSFASDPA RGMFILAYLV IVIGGSLLLY AVKGAQVRSR TQHEVFSRET FLLGNNVLLI 360
  361 AAMLVVLLGT LLPLVHKQLG LGSISIGEPF FNTMFTWLMA PMALLMGIGP LVRWRRDEPS 420
  421 KLWKRLSVAL VVTLLLSISV PWLLQDSVAG MTVVGLMMAI WVIILTLMEL HERATHRYGF 480
  481 WRGLTHLSRS HWGMVLGHLG VAVTVIGIAF SQNYSVERDV RMKAGDSIDI HDYHFTFRDV 540
  541 HDIKGPNYTG GVGIIDVTRN GKLEATLHAE KRYYSVARSM MTEAAIDGGL TRDLYAALGE 600
  601 ELGDGSWAVR LYYKPFVRWI WFGGIFMAVG GIFCMLDPRY RMSKKLKRGA IPEAES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle