YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Q66DI0\|Q66DI0_YERPS
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYDSVLKTF VDDDYRLEDH LDFKKQHADI RYQKLHKQLN EMSDENMHAL LTIEEGEYFL  60
   61 KTLCNPNPHQ SWKDAIFSCT DPTSVFFGSL VESLSVSRIV FEIRGFGVTA TEYVGKNGSS 120
  121 YIKLSGYAGI RKYLDATRYL IDNPKILDIG IGTQSIENGI VRGARFCIVF SAAYRSVELL 180
  181 LKDEYGLADF FVNLTLDAAK LGVSIGVAWG AKALATGFMV AGGSVLAIAI GIFTIGVLAS 240
  241 LILYWLDNEY KISETIIKNI KSHRVQNSPY HADQFFNAWG RLSRG

Type	Start	End	Confidence
Cytoplasmic	1	200	0.88
Transmembrane Helix	201	216	0.51
Non-Cytoplasmic	217	217	0.35
Transmembrane Helix	218	246	0.79
Cytoplasmic	247	285	0.61