YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DEOB_YERPS
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRTFIMVLD SFGIGASADA KKFGDEGADT LGHIAEACAR GEANVGRSGP LTLPNLSRLG  60
   61 LGKAAEESTG TFPVGLDKNA DIIGAYGYAS ELSSGKDTPS GHWEIAGVPV LFDWGYFSDV 120
  121 ENSFPQELLD KLVKRANLPG YLGNCHSSGT VILDQLGEEH MKTGKPIFYT SADSVFQIAC 180
  181 HEETFGLDRL YELCEIAREE LTDGGYNIGR VIARPFIGDK PGHFQRTGNR HDLAVEPPAP 240
  241 TMLKKLVDEK GGEVVSIGKI ADIYAQVGIT QKVKATGLDA LFDATIEEMK KAGDNTIVFT 300
  301 NFVDFDSSYG HRRDVAGYAA ALELFDRRLP ELMALVKEDD ILILTADHGC DPTWPGTDHT 360
  361 REHIPVLVYG PKVKPGSLGH RETFADIGQT VAAYFGLSPM DYGKNML

Type	Start	End	Confidence
Signal Peptide	1	18	0.94
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	407	0.99