YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51587935, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVKIISRGG IKPLLFMRRV LITFGLTLGL SACSSLSDPP QFSASGYIAD SGVVRLWRQD  60
   61 NAQQQPQVLM SVYSPYFGGN TRVTFYEYQN GILREIRRND LGATPQSVQL RFDEQGQVSF 120
  121 MQRQLASRRE SLSADDIAVY QLEAKRILEL SRVLRAGDVR LIQGRWQDGM LTTCAGKTLR 180
  181 LNLDDNSQAW LTTRGEKNTQ PLGVAWLDSS EGQQLLLVAN QDFCRWEPQA GSL

Type	Start	End	Confidence
Signal Peptide	1	37	0.93
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	233	0.99