YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2895279
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKFILSLSI LLSALLVACS SRNHYGDTGS LAGLQAMADS KYTRAQKKQK MGKIREMALK  60
   61 ETALSVGAQA GLAWRAKIID EQLNKQARNL DAIYDFNSLV LEHNILPPVL LEGRNTLNLA 120
  121 DAQSIRISDR TYKVAKQAHF ITTPPTWRQY LWMDYVKPEA PNVTLLPKTK AEKEIWCIYT 180
  181 ERGWKNGIDQ ANTILEENIA RIKEDFGGMI LYRKLLAMNM VSPPYVSHTD LGVTGDGSEI 240
  241 HIDDRVLRIT ALPELNVNSA EWRAAVAKDE NALERFKNME KLANQAKIVI TNKSWQPIIA 300
  301 PVS

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	303	0.99