YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52841028, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMKMKLVTA AVMGLAMSTA MAATDATSLA TDKDKLSYSI GADLGKNFKN QGIDVNPEAM  60
   61 AKGMQDAMSG AQLALTEQQM KDVLNKFQKD LMAKRTAEFN KKADENKVKG EAFLTENKNK 120
  121 PGVVVLPSGL QYKVINSGNG VKPGKSDTVT VEYTGRLIDG TVFDSTEKTG KPATFQVSQV 180
  181 IPGWTEALQL MPAGSTWEIY VPSGLAYGPR SVGGPIGPNE TLIFKIHLIS VKKSS

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	235	0.99