YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52627808, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAEHDQNND EYKFAELDSY DMDQAGESDL DSEASYQSGK EGLTKKKDIK RNALIAIGAV  60
   61 VFIMVMYKII GWMFFSDKSS QVTSKPAIPP VTQVATPQPV QTIPTTTPIQ QVQPTTIIED 120
  121 DPDLKKKVSA IEMTQQSLRS EVNALSEQIN AVNNNIKNLN AQIVNLNQII GNMSNQIARQ 180
  181 SEVINVLMAR TTPKKVVKVS RPIVQARIIY YIQAVIPGRA WLIGSNGSTL TVREGSKIPG 240
  241 YGMVKLIDSL QGRILTSSGQ VIKFSQEDS

Type	Start	End	Confidence
Cytoplasmic	1	52	0.98
Transmembrane Helix	53	75	0.92
Non-Cytoplasmic	76	269	0.99