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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34740097
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLYLLYLL ASFTTVISKE VTGVFNQFNS LIWSYTYRAR YEEISTLTAK AQLEWALDGT  60
   61 IASPGDTFTL VMPCVYKFMT YETSVQLTAN SIAYATCDFD AGEDTKSFSS LKCTVTDELT 120
  121 EDTSVFGSVI LPIAFNVGGS GSKSTITDSK CFSSGYNTVT FFDGNNQLST TANFLPRREL 180
  181 AFGLVVSQRL SMSLDTMTNF VMSTPCFMGY QSGKLGFTSN DDDFEIDCSS IHVGITNEIN 240
  241 DWSMPVSSVP FDHTIRCTSR ALYIEFKTIP AGYRPFVDAI VQIPTTEPFF VKYTNEFACV 300
  301 NGIYTSIPFT SFFSQPILYD EALAIGADLV RTTSTVIGSI TRTTTLPFIS RLQKTKTILV 360
  361 LEPIPTTTVT TSHHGFDTWY YTKKATIGDT ATVFIDVPQH TATTLTTYWQ ESSTATTTYF 420
  421 DDIDLVDTVI VKIPYPNPTI ITTQFWSGKY LTTETHKEPP LGTDSVIIKE PHNPTVTTTE 480
  481 FWSESFATTE TITNNPEGTD SVIIKEPHNP TVTTTKFWSE SFATTETITN NPEGTDSVII 540
  541 KEPYNPTVTT TEFWSESFAT TETITNGPEG TDSVIIKEPH NPTVTTTKFW SESFATTETV 600
  601 TNGPEGTDSV IIKEPHNPTV TTTEFWSESY ATTETITNYP EGTDSVIVRE PHNPTVTTTE 660
  661 FWSESFATTE TITNGPEGTD SVIIKEPHNP TVTTTKFWSE SFATTETITN NPEGTDSVII 720
  721 KEPHNPTVTT TEFWSESYAT TETVTNGPEG TDSVIIKEPH NPTVTTTEFW SESYATTETI 780
  781 TNGPEGTDSV IVREPHNPTV TTTEFWSESF ATTETITNGP EGTDSVIIKE PHNPTVTTTK 840
  841 FWSESFATTE TITNGPEGTD SVIIKEPHNP TVTTTKFWSE SFATTETITN NPEGTDSVII 900
  901 KEPHNPTVTT TEFWSESYAT TETVTNGPEG TDSVIIKEPH NPTVTTTEFW SESYATTETI 960
  961 TNGPEGTDSV IIKEPHNPTV TTTKFWSESF ATTETITTGP LGTDSIVIHD PLEESSSSTA1020
 1021 IESSDCNISS SAQDSSSSVE QSFTSADETS SIVELSSSSD IPSSSIGLTS SESSTVSSYD1080
 1081 SYSSSTSESS IASSYDSYSS SSIESCTLSS SDRYSSSISD TTSFWDSSSS DLESTSITWS1140
 1141 SSIDAQSSHL VQSVSNSIST SQEISSSSSE ESSTSATDAL VPSDASSILS SDTSSYYPSS1200
 1201 TISPSDDFPH TIAGESDSQS FSFITSTVEI SSDSVSLTSD PASSFDSSSR LNSDSSSSPS1260
 1261 TDQRDILTSS SFSTLIKSSE SRESSSGTIL SEESSDSIPT TFSTRYWSPS GMSSRHYTNS1320
 1321 TETSVSDVVS SSVAGDETSE SSVSVTSESS ESVTSESVAS ESVTAVSDIS DLYTTSEEVS1380
 1381 TSDSKIVPST SVPSSEQRSS IPIMSSSDES SESRESSIGT ILSEESSDSI PTTFSTRYWS1440
 1441 PSGMSSRHYT NSTETSVSDV VSSSVAGDET SESSVSVISE SSESVTSESV ASESVTAVSD1500
 1501 ISDLYTTSEV VSTSDSKIVP STSVPSSEQR SSIPIMSSSD ESSESRESSS GTILSEENSD1560
 1561 SIPTTFSTRY VSVSLTVGEL SALPSLPGKL SHLPSSLSET SIGMTKSANL SPQFFSTSVD1620
 1621 SALSYWASGS SSADHQSSAT CDVSESSVEG NLSAMALGMS NSDDGLSEDT RSSSVAGKEE1680
 1681 IELTSTNSVG EITLISYSSS SPTTHDHGRV SKSMGAAPLS SLFSVSVHAP LVTGLSDSDT1740
 1741 FPSENSNRSR SFKESTDNTI SISRESLGNP YSSISSPSDY DVKSFTTSRE LVSSESILPF1800
 1801 SDVMDANDMP TSGSNLHSMV FSISVLGEKF NANIEKHKNT NGHYSSMVFT YQSAGLEESD1860
 1861 QRIAVTNTKF DQNKIDTTID SNTFVTSLPF ATTSHDQIDQ AVPIKIPASS TAGFVSDVLK1920
 1921 PDYSKSVQAE SVQTDSTTYS EMMSSKRNKN SGFGTSSLNL KPTITVVTKS IDTKVNTMKE1980
 1981 GGVSKQVSTT VTEQYDTSTY TPASLLVSDN SGSVSKYSLW MMAFYMLFGL F

YRC Informatics Platform - Version 3.0
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