YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27752377
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QMKSESYISL LIASFFVLLL PAFSSAAEES STPIGCGHTS HRNMATLGGV HESHGAQNSA  60
   61 EVEDLARFAV QEHNNKENAL LEFVSVVKAK EQVVAGTLHH LTIEAIEAGK KKLYQAKVWV 120
  121 KPWMGFKEVQ EFKHADEEET PSVTSSDLGV KQGGHPPGWQ SVPPHDPQVQ DAANHAVKSL 180
  181 QQRSNSLLPY ELQEVVHAQA EVAEEHAKFN MLLKVKRGSK EEKFKAEVHK NMEGTFSLNQ 240
  241 MEADHS

Type	Start	End	Confidence
Cytoplasmic	1	6	0.65
Transmembrane Helix	7	27	0.63
Non-Cytoplasmic	28	246	0.98