YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157936337, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFPLRHTLL ASFSMLAAAC TTPTLVNRGD YYADTSLPAR SVDSRIRFLV MHYTEIGEAP  60
   61 SLRVLTQENV SAHYVVPDAP RTERGAPVVY QLVPESERAW HAGVSAWQGA TELNGVSIGI 120
  121 ENVNRGPIDT PHGRMWAPYP PAQVDAIVRL AKDIVARYRI PPTRVVGHSD IAPQRKIDPG 180
  181 PLFPWRALAK AGVGAWPDDE TVAARLAGRP PKSLVDVREL QLKLARYGYD VATDGVLDDR 240
  241 TRRVFSAFQM HFRPTDYAGN PDAETDAIAQ ALLDKYMPSQ PAPERDAAAL DAASGVAAQ

Type	Start	End	Confidence
Signal Peptide	1	28	0.87
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	299	0.99