YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238522398, gi...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFVRSLLLF VYFIVYTVPY ATACFIAFPF MRPNARYWMA VGWCKSTLFV ARWLTGIRYR  60
   61 VEGYENLPDG PAVLLPKHQS AWETIALPAL MPKPLCYVFK RELLYVPFFG WALGMLHMVH 120
  121 INRKDGKNAF DSVIRQGRKR MAEGAWVIMF PEGTRTPVGS QGKYKTGGAR FAIGAGAPVV 180
  181 PIAHNAGRVW PRNSFTKYPG TVTVSIGQPI DTQGLTPDQL NERVENWIEA EMRRIDPHAY 240
  241 RHERDGARGA ARASDAAHP

Type	Start	End	Confidence
Cytoplasmic	1	7	0.81
Transmembrane Helix	8	30	0.86
Non-Cytoplasmic	31	36	0.78
Transmembrane Helix	37	56	0.51
Cytoplasmic	57	259	0.51