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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34559878, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFFWTLAVIV IYCIGHIHGR CERSIDLDNG SINYRQRNVV RFRCNRGYTL QGTVMQTCDR  60
   61 DGRLRGEKPF CASRGCARPE DPENGHVENL SLRADVVCHD GYVLVGGRTA YCDGERWSTQ 120
  121 LGSCRRSNHT RDHSCDFESE DQCGWEAETT FRRPWKRVST VSDIHSLRTG PRHDHTFKNE 180
  181 SGGHYMRMET QMGAYGSYHL LSPIYPRSLT LKTACCFRFH YFMFGAGVDN LVVSVKPVSM 240
  241 PMATMWNRFR ANCSKFEISG QQGTQWLEHT ISIDEMQEDF QVIFTATDAR SQFGDIAIDD 300
  301 VKLMTGSECG TNGFTTTTEP TAPTGSNEQP LVYDMMSCSG RCGTSISASN ITNNGIVMGC 360
  361 GCNDECLSDE TCCLNYLEEC TKELLTTTED DISSLPPTVT STSTSTTRKS TTTTTTSTTS 420
  421 TSTTTTKRPT TTTTTTKATT TKRTTTTKKP TTTSTTPKPT TTTSTTPMTT TSTTFTTSTT 480
  481 STRPTTTTTI NVFTTKKTTI MIPTSSTEKT TGINTTMKTL KRITWNVDPQ DIEGHMDTSG 540
  541 STPNPALVVL YLLLGIVLVV VLANVVNRWI IPITGSKTSS EKAVRFKKAF DSLKKQRKRN 600
  601 S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle