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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|53758420, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEDLTSPPA MRQRFLRSLG SICLIVILAE VIVMTLLGAL HRGGLELVRW QESALDGLLL  60
   61 GLFSAPLLWI MALRPLAQQI ARESQRNKEL LDALDAHALV SITDLQGRIL YANDNFCAVS 120
  121 RYGREELVGQ DHRIVNSGYH GKAYIRDMWR TISRGNIWQG EFCNRRKDGT RYWVDSTIVP 180
  181 LMDNAGKPRQ YISIRRDITA QKEAEAQLAR LKQAMDANSE MILLTDRAGR IIYANPALCR 240
  241 FSGMAEGELL GQSPSILDSP LADQETLAAM QEALQAGQPW SGRLLNRRRT GPAPHDAEDY 300
  301 WAEISTTPIH TDGNGLVGYV QIQHDVSARV ERERALAMEQ EDTAARLRIT ETLQQSAPLD 360
  361 ERCRQVLRIL FELGTFGLQR KGGIFLKAEH GNCLKLFVLE GKFCDEFVRR EQTIPMGACL 420
  421 CGRSAVSGEI LVSDDCFQDH RHEHRFEDME SHGHYIVPIA SGGDLLGVLF LYTDPNPTRS 480
  481 EARMVMLRQV GEMLALAILE DRAKASLKAA HDAAVDAAQA KSAFLANMSH EIRTPMNGVL 540
  541 GMLELLKDTD MSREQWDLVE TASNSAESLL EIINSILDFS KLEAGKVEIE RTEFNLPDLV 600
  601 EEVCALLAGR AHDKGLELNC FLPADLPRMW IGDPTRIRQI LTNLLGNSVK FTERGEVSVK 660
  661 VMQGEAGAKR TDLSFEIRDT GIGIAPDVQA RLFQPFTQAD GSTSRRFGGT GLGLSICRNL 720
  721 VELMGGTIGL ESAPGRGSRF WFTLPLEPLP GASAPALPDF SHRRVLVVDD NATNRVILSH 780
  781 YLTHWGLEVD EAERGDTALN RLRTALHESR PYDIVLLDLH MPYMDGHELA RAMNAEPGLK 840
  841 DTPRLLLSSG GLTGEAELRA LGIARSLLKP VRQSLLFNAI AEVLAAKATV QRRPAAKTET 900
  901 VLPAYEGRRV LVVEDNRVNQ KVIVAMLGKF GIVPDVADNG QAALELLARS SYDLVLMDCQ 960
  961 MPVLGGYEAT GELRAREMSA GGRRTPVVAL TAHAATGERE KCLAAGMDDY LSKPISRDRL1020
 1021 AEALERWLGH PAAPASAETG QGAVNDDGGD RPAGLSWNRE ETLARLDHDE ALLAEMIALC1080
 1081 IEELPRHLAA LQEAGAANDI AALADAAHAI KGMAGHFCAG SVRDLAARLE DQARKAGSMP1140
 1141 DAASIGALET AAARLLEDLH GGSPAGDPAK GTNDAAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle