YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53758236, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYDFSFFLV AATFVTGAVW GGYALWLKRH PLPEGTAHKE PILVEYARSF FPIVLVVMLL  60
   61 RSFLVEPFRI PSGSMMPTLL IGDFILVNKF TYGIRLPVLN TKIIEMNEPQ RGDIVVFRFP 120
  121 KDPTVDYIKR VIGLPGDRIG YYNKQLYVNG KPMPQTLLGI YQGVGQGASM SGAELLSEDL 180
  181 EGVEHDILIR HGQPTVQGEF TVPEGSYFVM GDNRDNSNDS RYWGVVPEAN LVGKAFFIWM 240
  241 SWDFENGGIG FSRLGTVLNS GR

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.79
Transmembrane Helix	7	27	0.95
Cytoplasmic	28	45	0.82
Transmembrane Helix	46	65	0.90
Non-Cytoplasmic	66	74	0.72
Transmembrane Helix	75	92	0.43
Cytoplasmic	93	262	0.51