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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|53757631, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDMLKNILL WVVIAVVLMS VFNNFGSRKS VDSSMSYSQF IAAVNEGQVK SVTIDGQNVR  60
   61 GMLGTGEKFS TYNPEDPHLI DDLLKNHVEI KAQPPESQSL LMQIFISWFP MLLLVAVWIF 120
  121 FMRQMQGGAG GRGAMSFGKS KARLIEEDQV KVTFADVAGA DEAKEDVAEM VDFLKDPSKF 180
  181 QKLGGKIPRG ALMVGPPGTG KTLLARAIAG EARVPFFSIS GSDFVEMFVG VGASRVRDMF 240
  241 EQAKKHAPCI IFIDEIDAVG RHRGAGLGGG HDEREQTLNQ LLVEMDGFEG TEGIIVIAAT 300
  301 NRPDVLDPAL LRPGRFDRQI VVGLPDVRGR EQILKVHMKR VPLADDVEAK YLARGTPGFS 360
  361 GADLANLVNE AALFAARKNK RVVEMEDFEK AKDKILMGVE RKSMVMSDEE KKLTAYHEAG 420
  421 HAIVGLMVPE HDPVYKVSIM PRGRALGITM FLPERDTYSA SKQKLESQIS SLFGGRLAEE 480
  481 IVFGREHVTT GAQNDIERAT NLARNMVTRW GLSERLGPLA YSEEEGEVFL GRSVTKHKSV 540
  541 SEETAHLIDE EIRSIIDRNY ERAERILREN MDKMHLMAEA LIKYETIDRL QIADIMEGRS 600
  601 PRVPQSWEDN TPPGSGESAS KGGDQPVSGS FGKPAEQT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle