YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53803358, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLLEFLGN HWMMAGALLV VTVLLIQDLL ESLFRKHKVL TPAGAVQLMN TEDTLVVDVR  60
   61 EPAEFAEGHI EGAYHIPLGK LEERASEIAQ YKEKPVIVTC QQGTRSPSAC KTLTKQGFSR 120
  121 IYEMRGGMLA WRDAHYPVTR KRKKS

Type	Start	End	Confidence
Cytoplasmic	1	7	0.57
Transmembrane Helix	8	26	0.88
Non-Cytoplasmic	27	145	0.66