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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|53802673, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKHHATRK PHPPAHWHLL EPWQITAWLK VDPQKGLSQR EAEQRLAERG PNLIIEQRPR  60
   61 GPLAMLLGQF ADFMIGVLML AGIVSGLVGE IADTVTIVVI IILNAAIGFV QEYRAERAIA 120
  121 ALKSMAAPLA RVVRDGQHHE LPAHELVPGD LVLLEAGNIV PADIRLLDTA QFRVEEAALT 180
  181 GESQPVGKST EAIRNPDAAL GDRRNMVYKG TVVTYGRGLG SVIATGMETE LGKIAQLLRE 240
  241 EKESRTPLQN RLAQLGKRLA LLVLAICAII FVVGLLRGEQ PILMFLTAVS LAVAAIPEAL 300
  301 PAVATVSLAL GARKMIRQHV LIRRLPAVET LGSVTYICSD KTGTLTQNRM RAEAFYADGR 360
  361 PGPELPEPML RAMALNNDVR VDKEGRLLGD PTETALYEAA AAAGHSGIDL AASCPRTAEI 420
  421 PFDSERKLMT TLHREGEGLV AYTKGAPEML LPRCRTVWRI QGPVPIQSDE LHEIAERMAA 480
  481 EGLRVMALAF REWPEPPAEL SPETVETGLC FLGFVGLMDP PRPEAAEAVA LCKTAGIKPV 540
  541 MITGDHPATA RTIALRLGIA DEDAPVLTGE ELARLSLAEF EKRVEEIRVY ARVAPEQKIK 600
  601 IVRALQDKGE FVAMTGDGVN DAPALKCANI GVAMGKSGTD VAREASHMIL LDDNFASIVA 660
  661 AVREGRRIFD NIRKFIKYTM TSNSAEIWTL FLAPFLMLPI PLLPIHILWI NLVTDGLPGL 720
  721 ALAVEPQERG IMQRPPRPPQ ESIFAHGMWQ HILWIGLLMG GVSLLSQAWA YHTGSAHWQS 780
  781 MVFTVLTLSQ MGHVLAVRSE RESFFALGFF SNKPLLGAVL LTFLLQMAVL YIPALHPIFR 840
  841 TEALEPHELA ACLVLSTLVF WAVELEKWMR RRGWIYREDR QTAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle