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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52308471, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.54
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRRKFIKAG MLGGVASALP LNAAHAEVKN QEPIPGALGM LYDSTLCVGC QACVAECQKI  60
   61 NGTPVNPKGE QTWSNNDKLS PFTRNVIQVW SEGEGTNKDQ PQNGYAYIKK QCMHCVDPNC 120
  121 VSVCPVQALT KNPKTGIVGY DPDICTGCRY CMVACPFDVP KYDYDNPLGQ ISKCELCNQK 180
  181 GVERIVQGKL PGCCHVCPTG AIIFGSREEL MAEAKRRLSM TQGTDYEFPR QHVNSKDKYQ 240
  241 AKIPAYEQHI YGEIEGGGTQ VLVLSGVPFE NLGLPQLDEI ATGARAAHLQ HTLYRGMILP 300
  301 LVGLAGLTFI TYRNMHGKKP EHHQEEDNNE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle