YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MURG_MANSM
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQRKKLLVM AGGTGGHVFP AIAVAQYLQK QGWDICWLGT KDRMEAQLVP KHGIPIEFIQ  60
   61 ISGLRGKGIK ALLGAPFAIC RAIMQARKII LRQKPDAVLG MGGYVSGPGG VAAKLCGVPV 120
  121 ILHEQNAVAG LTNVWLSKIA KRVLQAFPTA FPNAEVVGNP VRQDLFSMPD PEQRFAERTG 180
  181 KLRVLVVGGS QGARVLNLTV PEMAARLTDK LEIRHQVGAG SVEKITALYE EKGALSADVK 240
  241 ITEFIDNMAE AYAWADIVIC RSGALTVCEL AAVGTPAIFV PFRHKDQQQY LNAKYLADVG 300
  301 AAKIVQQAEL NADVLVDLLT NLDREQLLAM AIKAKQMSAP FAAQRVAEVI IENAN

Type	Start	End	Confidence
Signal Peptide	1	25	0.86
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	355	0.97