YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52307599, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.54
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKRLFDIVV ALIALILFSP LYLFVAYKVK QNLGSPVLFK QTRPGLHGKP FEMIKFRTMK  60
   61 DGVDENGNIL PDAERLTPFG KMLRATSLDE LPELWNVLKG DMSLVGPRPL LMEYLPLYNE 120
  121 RQAKRHEVKP GITGYAQVNG RNAISWEQKF ELDAWYVEHQ SLWLDLKIIA KTIQKVIAKD 180
  181 DINAADDATM PKFEGNKKS

Type	Start	End	Confidence
Cytoplasmic	1	7	0.42
Transmembrane Helix	8	26	0.53
Non-Cytoplasmic	27	199	0.94