YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52307109, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDYIIIGII VFSIVVSLLR GFVREVMSLA SWVVAFVIAS QFYPYLANFL TQIESEYLRN  60
   61 GTAIGILFIL TLIVGAIVNY VIGQLVDKTG LSGTDRVLGA CFGFLRGVLI VSALLFFVDT 120
  121 FTNFDQNDMW KESKLIPHFG FVVEWFFEQL QANSSFLNST LNK

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.68
Transmembrane Helix	5	23	0.84
Cytoplasmic	24	28	0.70
Transmembrane Helix	29	47	0.90
Non-Cytoplasmic	48	61	0.72
Transmembrane Helix	62	83	0.93
Cytoplasmic	84	96	0.79
Transmembrane Helix	97	118	0.88
Non-Cytoplasmic	119	163	0.79