YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52424565, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLIRIILV AICCVLICVL GTIFSLIRFR HPSNVGVMAR WFGRLYPLFG LRVEHRFPDN  60
   61 VDQNVPAIYI GNHQNNYDMV TISYMVRPRT VSVGKKSLIW VPFFGILYWA TGNIFLDRDN 120
  121 KNKAHNTMTE LARRIQQDNI SIWMFPEGTR SRGRGLLPFK TGAFHAAISA GVPIIPVVCS 180
  181 TTHKKIDLNR WNNGKVICEI MQPIDTQSYS KENVRELASH CYDLMKKRIA ELDAELAQVG 240
  241 K

Type	Start	End	Confidence
Cytoplasmic	1	6	0.38
Transmembrane Helix	7	26	0.61
Non-Cytoplasmic	27	241	0.66