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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PIGS_RAT
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAGAAATD LEVVRGKRAA LFFAAVAILL GLPLWWKTTE TYRAPLPYSE ISGLNALQLR  60
   61 LMVPVTVVFT RDSVPLDDQE KLPFTVVHER EIPLKYKMKI KCRFQKAYRR ALEHEEEALS 120
  121 LGSVHEAEAL LAEPEKQAEG SLTVYVISEH SSLLPQDMMS YIGPERTAIV RGMIHREAFN 180
  181 IIGRRIIHVA QAMSLTEDVL AAALADHLPE DKWSSDKRRP LKSSLGYEIT FSLLNPDPKS 240
  241 HDVHWDIEEG VQRYVQPFLN RLSAAGNFSV DSQILYYAML GVNPRFDPAS SSYSLAMHSL 300
  301 PHVINPVESR LGSSAASLYP VLNFLLYVPE LAHSPLYIQD KDGAPVATNA FHSPRWGGIM 360
  361 VYNVDPKIYN ASELPVRVEV DMAQVMEVFL AQLRLLFGIA QPQVPPKCLL SGPKSEGLMT 420
  421 WELDRLLWAR SVENLATATT TLTSLAQLLG KISNIVIKDD VASEVYRAVA AVQKAAEALA 480
  481 LGHLSSAFAA SQEAVTSSER AFFDPSLLHL LYFPDDQKFA IYIPLFLPMA VPILLSLVKI 540
  541 FLETHKSWKK PEKID

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle