YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46203027
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAATVLDWG LGLAQGMLVL AMALAAWRML RGPRAQDRIL GLDTLYLNGM LTIVVHGMRT  60
   61 GSGLYFEAAL ILGMIGFTAT VALAKFLMQG EVIQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	8	0.84
Transmembrane Helix	9	30	0.89
Cytoplasmic	31	38	0.89
Transmembrane Helix	39	58	0.86
Non-Cytoplasmic	59	65	0.69
Transmembrane Helix	66	87	0.91
Cytoplasmic	88	94	0.84