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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23013681
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIKSI LIIGAGPIVI GQACEFDYSG VQACKALKDE GYRVILVNSN PATIMTDPGL  60
   61 ADATYIEPIT PEIVAKIIEK ERPDALLPTM GGQTALNTAM KLADMGILEK FGVEMIAAKR 120
  121 DVIAKAEDRL LFRDAMDKIG LESPKSRMVK TLQEARDALD FVGLPAIIRP SFTLAGTGGG 180
  181 IAYNVAEYEH IVSGGLAASP VHEVLVEESV LGWKEYEMEV VRDKKDNCII ICSIENVDPM 240
  241 GVHTGDSITV APALTLTDKE YQIMRNASLA VLREIGVDTG GSNVQFAVNP KDGRMTVIEM 300
  301 NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELTNDIT GCTPASFEPT IDYVVTKIPR 360
  361 FTFEKFPGAD TNLTTSMKSV GEAMAIGRTF QESLQKGLRS METGLTGLDE VEIPGAGAGD 420
  421 MKDAVKSALA QPRHDRLLVI AQAFRLGLSI DEVHAACFYD KWFLAQLKGI VDAEAEVKAK 480
  481 GLPIDAPGLL RLKKMGFSDQ RLSKLSGKSL VETAFRREVL NVKPVFKRID TCAAEFPSST 540
  541 AYMYSCYEGD GVNAAECESD PSDREKVIIL GGGPNRIGQG IEFDYCCVHA AYALDEAGKE 600
  601 TIMVNCNPET VSTDYDTSDR LYFEPLTAET VIDLVRREQS NGKVLGCIVQ FGGQTPLKLA 660
  661 HALENAGIPI LGTSPDSIDL AEDRERFQKM LHELGLKQPA NGTARSLEEA IKVAEKIGYP 720
  721 VVIRPSFVLG GRAMQIVYDH EALERYMVEA VKVSGDDPVL IDFYLKDAIE VDVDALCDGN 780
  781 QVYVAGIMQH IEEAGIHSGD SACSLPPYSL DKATIAELER QTAAMAKALN VVGLMNCQYA 840
  841 IKDGDIYILE VNPRASRTVP FVAKATGVPI AKIAARVMAG ETLASFGLST RPELKHVAVK 900
  901 EAVFPFARFP GVDILLGPEM KSTGEVMGID SDFARAFAKS QLGAGTNLPT EGGAFISVRD 960
  961 GDKPAMVEIA RRLLEMGFKV MATDGTAFYL KDRGVTGVTI VNKVLEGRPH CVDAMMNGQV1020
 1021 QLVVNTTEGS QAVKDSFSIR RTALTNNIPH YTTVAGARAA VEAIEAMRCG TLDVAPLQSY1080
 1081 FKGSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle