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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23014940
Protein type: Transmembrane
Type Confidence: 0.55
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSTQIRIVV RLIAGFSAML LLTVVMAVMA GRSMLIMADL ANELYIHPFA VTNALIQVES  60
   61 QINAIRAASL TMIYGRSPSD VQRMLSLIAI HENEMAASMA VVKGRHLGDP DDVNRLSNEL 120
  121 AQWKQIRDLN SLYCQTGEFD KAAENFLHNS APQIALLRRH TAALYAFAQD KAAEFNHSIG 180
  181 DRRDQVIRDI LLTLFGLLLL GALLARLITR SIVVPLGELR EAMHRLANGD LDAHIPNRSR 240
  241 VTEVSRMAAA VEVFKQAALR LESERWVKDN VARLSPALQQ TETIAEFAAT ALDFLVPLSG 300
  301 AGVAVFHARP GGATRFIRVA AWGLAPGSDG SPGLTSFAPG EGIAGEAARS GNSIHIAAPP 360
  361 ESWLRVASAT GMGAPAAVLA VPVMSRGAAL AVMEFASFTP FTDDQRAVIE AALPMLALNI 420
  421 EILERNLRTR DLLEESQAQA EELKASEEEL RAQGEALQAA NEELRVSEEE LKVQQEALQS 480
  481 ANEELRLNAE ALEARGLALE EARTEADRRA IEIEQASRYK SEFLANMSHE LRTPLNSVLI 540
  541 LARDLADNET GTLSDDQVES ARIIHESGAH LLALINDVLD LSKVEAGKMS LDPVTIATAD 600
  601 LAQVIRGRFG PVAADKGLEF TVESAPDLPR TMKADRGKIE QIANNLVSNA IKFTPEGGVA 660
  661 VRLALDHDGQ ALALSVADTG IGILPEDRQR VFAAFEQADS STSRQFGGTG LGLTISRRLA 720
  721 RLMGGDITLE SNGDRGSVFT LLMPLGGPVP QPAPPPCAPE PPPESIAAPQ AAEEAQAEEP 780
  781 QAEGRLLLVI EDDPIFRRVV CDMAKAKGFT TVTAEDGKSG LDLARLRRPC GIVLDIGLPG 840
  841 MSGWEVIETL RRQPETRDIP VHVISAGDER AKAAGMGTVG HLTKPVSREQ INSAFEVLLR 900
  901 AGNTLDRRRL LLVDGDGASR ASVRETLLGL NLDITVEETG EQALKRLAEG PFDCMVLDLA 960
  961 LPDMPGGEFL ERAERTPSGL PPVIVYSRQE LSQDETVRIQ EFTDSIVIKG ARSSERLLDE1020
 1021 VGLFLHAVEA RKSGKSKSPT PTEPVDGILA GRTVLLVDDD MRNAFALSKV LRTKGLKVLI1080
 1081 AQDGTKALSQ LRSRSDVDLI LLDIMMPGMD GYQTMGEIRK DPRYAHLPII ALTAKAMAGD1140
 1141 RDRCLASGAD DYLTKPVDVE LLRKAMAGLM TRGHHAEPE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle