YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46200935
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGTLVAGI VAVCVLSCGA MAQQAQPIVI KFSHVVAPDT PKGKAAEYFK KLAEERTKGR  60
   61 VKVEVFPNSM LYKDKEELEA LQLGAAQMLA PSLAKFGPLG IKEFEVFDLP YIFPSKDVLR 120
  121 AVTGGPVGAS LLKKLETKGI IGLAYWDNGF KILSANKPLI SPADLKGLKM RIQSSKVLDA 180
  181 EMRALNAQPQ PIAFSEVYQA LLTGVVNGTE NPPSNMYTQK MHEVQKHATL TNHGYLGYAV 240
  241 IVNKKFWDSL PSDIRAILEG AMSEATVYAN AIAQAENDDA LKAMKASGKT EFHDPTPAEL 300
  301 EVWRKTLLPV HRDMENRVGK DLIESFYREA IKFGFRN

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	337	0.99