YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25987073
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAANAPFAL VSRLSSPATR LPARAWRAAR PAPVAAGRTR PLTTASASQE NRDNSVDVQV  60
   61 SQNGGNQQGN AVQRRPRRAG FDISPFGLVD PMSPMRTMRQ MLDTMDRLFD DTVGFPTTRR 120
  121 SPATASEVPR MPWDIMEDDK EVKMRFDMPG LSRDEVKVMV EDDTLVIRGE HKKEAGEGQG 180
  181 DGAEGQGDGW WKERSVSSYD MRLTLPDECD KSQVRAELKN GVLLVTVPKT ETERKVIDVQ 240
  241 VQ

Type	Start	End	Confidence
Signal Peptide	1	25	0.75
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	242	0.99