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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52857918
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILLAGINWA VGGSGSNGST ENIRYSQLVK DLKAGKVKSI NVQPSNGVYT VTGSYKKAQK  60
   61 SKNQNNTGFG LIPSSQSSSE VTRFSTTMLQ NDSMVKTVSD LAQKSGASIS GQGESQSGTW 120
  121 ISTIVMLVPT LIFIVMLWMM MNQGGQGRGG GMMNFGKSHV KPQDPSKNKV RFSDVAGEEE 180
  181 EKQELVEIVE FLKNPAKYTK LGARIPAGVL LEGPPGTGKT LLARAVAGEA GVPFYSISGS 240
  241 DFVEMFVGVG ASRVRDLFET AKKNAPSIIF IDEIDAVGRK RGNGVSGGHD EREQTLNQLL 300
  301 VEMDGFEGDE GVIVMAATNR SDVLDPALLR PGRFDRKVLV GRPDVKGREA ILKVHAKNKP 360
  361 LAPDVDLKEV ARQTPGFVGA DLENVLNEAA LVAARRNKTE ITASDIDEAE DRVIAGPAKK 420
  421 DTVISPEERK RVAYHEAGHA IVGLVLSDSR TVRKVTIVPR GRAGGYNIML PKEDENIITK 480
  481 KQLMEQVAGL MGGRAGEEVV VGDKSTGASN DFEQATNIAR GMVTQYGMTD VGMTELESPS 540
  541 MQVPYGTKPY SEATAAKIDE AVKEILDEGH KQAVDIIKSH RETHKIIAEA LLKYETLNEK 600
  601 QILSLFKTGK MPENDENEFP SESKASTYEE AKAAMEKKDQ QREETENKDD KEDVHPLPDD 660
  661 HKNIDDIPLN PPSEKKNSDE HNSDENKDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle