YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32892274
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSTFFNLTM AFSLSLLGTL MFRSHLMSTL LCLEGMVLSL FIMTSVTSLN SNSMSSMPIP  60
   61 ITSLVFAACE AAVGLALLVK VSNTYGTDYV QNLNLLQC

Type	Start	End	Confidence
Cytoplasmic	1	20	0.39
Transmembrane Helix	21	49	0.73
Non-Cytoplasmic	50	58	0.53
Transmembrane Helix	59	79	0.83
Cytoplasmic	80	98	0.57