YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221639514, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGLLGLSRS IDRMNELIGR GVSWLILIAI FISAGNATVR KVLNTSSNAW LELQWYLFGA  60
   61 AFLFAAAYTL KQNEHIRIDI VYGLFSRRVQ HWIDLFGHLV FLMPFVLLML YYLGPYVERS 120
  121 WRTGEISNNA GGLTIWPAKS LLLIGFFLLA LQGLSEIIKK IAVMRGLIPD PAPFISAHEA 180
  181 AEREGELLAG EAKLSETRPG EVPK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.89
Transmembrane Helix	21	39	0.94
Non-Cytoplasmic	40	52	0.84
Transmembrane Helix	53	70	0.96
Cytoplasmic	71	91	0.92
Transmembrane Helix	92	114	0.92
Non-Cytoplasmic	115	134	0.92
Transmembrane Helix	135	155	0.91
Cytoplasmic	156	204	0.97