YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71066613, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGIENYLGF VMAAILLNVT PGTDSMYIIT RSMSQGQTAG FYSVLGITSG ILVHTLLAAF  60
   61 GLSVLLASSP LAFTLVKYIG ASYLCYLGFK MLTSKPVPLL ASNLPNEEKM ATAQPLDRWQ 120
  121 IYKQGVITNT FNPKVALFFL AFFPQFIDPS YANSMLSFLV LGLSFATTGF IWCSCLALLA 180
  181 SKFSENLRKK PAIEVILNRI SGVIFIGMGI KLLTEKG

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.71
Transmembrane Helix	7	29	0.83
Cytoplasmic	30	38	0.73
Transmembrane Helix	39	62	0.84
Non-Cytoplasmic	63	65	0.53
Transmembrane Helix	66	89	0.67
Cytoplasmic	90	125	0.82
Transmembrane Helix	126	147	0.74
Non-Cytoplasmic	148	155	0.82
Transmembrane Helix	156	180	0.87
Cytoplasmic	181	194	0.92
Transmembrane Helix	195	214	0.82
Non-Cytoplasmic	215	217	0.80