YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TATB_PSYAR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDIGFSELL LFGVIALIVL GPEKLPQAAR TAGQWYAKIR RTVSTLQSEI EAELDLAETR  60
   61 QLMQKELAKI RQTEAEMRRE MAEMRGSIKE FEHSQSQNLK TSDKAASPAN QANNDSAIQN 120
  121 NNEPATFSYA YGQSNNLTDS QQLSNQDITS INSDAVTDSS TIKQPAQPLI TKPWENMWFR 180
  181 LGAYDKARRL PAVPYLPNYK ADILLNSSFD SSFDSPLNTQ ASVNQQESE

Type	Start	End	Confidence
Signal Peptide	1	28	0.75
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	229	0.95