YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15594555, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKHTNFSV LLLLIFLLIL SFGGFGYYIY QSKLNDKNRE IMLNEVKNSV IDRNYKKAYS  60
   61 VAKLLQDKYP QNEDIAMLTN TLAEIANSSP FESKDLQRDS ANQILDKIKG QDNTKTNVNE 120
  121 NFDIAFNNRY IKDSTITENY SDRNDDVGIE DEDISEFKKS KIPEKIKPNT NPKEEDQIIQ 180
  181 SPNPKLSVND QKNLFNLEKL KKNLSGKSNS ENILNDSQKI ENDKQNTNLS KEKNSENILK 240
  241 TPDNSKYSNN NNTTSLKKIS SNSQKESELS PPSQTIIGKI YRPYSYLIKK ELYEILDDIN 300
  301 TGRVTLGKNR LKELIKKGLS NKFQKVNELI ENSKNKEASN LLLTLIKKDI EPNLINIPKD 360
  361 PYKKEIFQLD KEDKKPQYLE DLKSKVHSIK PIDLENTKSR QQAIKDLNEF LKNNPNDAQA 420
  421 SKTLAQANKI QHLEDLKSKV HSIKPIDLEN TKSRQQAIKD LNEFLKNNPN DAQASKTLAQ 480
  481 ANKIQHLEDL KSKVHSIKPI DLENTKSRQQ AIKDLNEFLK NNPNDAQASK TLAQANKIQH 540
  541 LEDLKSKVHS IKPIDLENTK SRQQAIKDLN EFLKNNPNDA QASKTLAQAN KIQHLEDLKS 600
  601 KVHSIKPIDL ENTKSRQQAI KDLNEFLKNN PNDAQASKTL AQANKIQHLE DLKSKVHSIK 660
  661 PIDLENTKSR QQAIKDLNEF LKNNPNDAQA SKTLAQANKI QHLEDLKSKV HSIKPIDLEN 720
  721 TKSRQQAIKD LNEFLKNNPN DAQASKTLAQ AYENNGDLLK AENAYEKIIK LTNTQEDHYK 780
  781 LGIIRFKLKK YEHSIESFDQ TIKLDPKHKK ALHNKGIALM MLNKNKKAIE SFEKAIQIDK 840
  841 NYGTAYYQKG IAEEKNGDMQ QAFASFKNAY NLDKNPNYAL KAGIVSNNLG NFKQSEEYLN 900
  901 FFNANAKKPN EIAIYNLSIA KFENNKLEES LETINKAIDL NPEKSEYLYL KASINLKKEN 960
  961 YQNAISLYSL VIEKNPENTS AYINLAKAYE KSGNKSQAIS TLEKIINKNN KLALNNLGIL1020
 1021 YKKEKNYQKA IEIFEKAIIN SDIEAKYNLA TTLIEINDNT RAKDLLREYT KLKPNNPEAL1080
 1081 HALGIIEYNE NNNDQTLREL IKKFPNYKKN ENIKKIIGI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle