YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TA2R7_PAPHA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDKVQTTLL FLAIGEFSVG ILGNAFIGLV NCMDWVKKRK IASIDLILTS LAISRICLLC  60
   61 VILLDCFMLV LYPDVYATGK QMRIIDFFWT LTNHLSIWFA TCLSIYYFFK IANFFHPLFL 120
  121 WMKWRIDRVI SWILLGCMVL SVFINLPATE NLNADFRRCV KAKRKTNLTW SCRVTKAQHA 180
  181 STKLFLNLVT LLPFSVCLVS FFLLILSLWR HIRRMQLSAT GCRDPSTEAH VRALKAVISF 240
  241 LFLFIAYYLS FLIATSSYFI PETELAVIFG EFIALIYPSS HSFILILGNN KLRRASLKVL 300
  301 WTVMSILKGR KFQQKQI

Type	Start	End	Confidence
Non-Cytoplasmic	1	8	0.91
Transmembrane Helix	9	32	0.86
Cytoplasmic	33	50	0.84
Transmembrane Helix	51	72	0.90
Non-Cytoplasmic	73	89	0.89
Transmembrane Helix	90	109	0.87
Cytoplasmic	110	128	0.79
Transmembrane Helix	129	148	0.93
Non-Cytoplasmic	149	188	0.96
Transmembrane Helix	189	209	0.94
Cytoplasmic	210	232	0.93
Transmembrane Helix	233	255	0.84
Non-Cytoplasmic	256	266	0.72
Transmembrane Helix	267	288	0.91
Cytoplasmic	289	317	0.96