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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|99078472, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEQKTPDGP DHHPVEAALR QLAPLRRALL LTRAGMVAER LWRSFWPLAT VLLLAAGLVL  60
   61 LGIFDWVVLE VAWGGAVLVV LGAVAATVWG VMLFRWPKPH EAVARLDETL PGRPIAAILD 120
  121 HQVSGAEDAA SVALWQAHQA RMAARAAEAE APAPNLRIAD RDPYALRYVA LLVLVTGLLF 180
  181 GTAWRAGRVA ELMPGGGNAG LNGPTWEGWV EPPRYTGLPT LYLGDLTEDT LRIPQNSRVT 240
  241 LRFYGDVGDL TLAETVSGRT GELPSASAPE QNFTVTEAGD LTIDGAGGRS WRVEVIRDAP 300
  301 PLVSLAGEPD LSADGTLTLP FNASDDYGVV GGTVTISLDG AALDRRYGLA TAPDARDPIT 360
  361 LPLPLSLTGD RRLFSEVLEE EFSAHPWANL PVIYSLRAED AAGQQSVAAT LHGPLTARRF 420
  421 FDPMAAALVE QRRDLLWARA NGPRVAKILR TLSHRPEELF SDMGNYLQLR TILKRLERYS 480
  481 AHGLSPVHQD EIASALWALA LQLEEGDVGD ALERMRQAQE RLSQAMRDGA SDEEIARLMQ 540
  541 ELREATDDYM RQLSRQAQQQ DGDQEGGESS DNAIQLSQQD LQAMMDRIQE LMEQGRMAEA 600
  601 EQALREFQQM MENMQVTQGQ PGQGDSPGQQ AMDGLADTLR EQQGLSDQAF RDLQEQFNPN 660
  661 AQRGESQGNE GRDGGLGRGQ SHQGGGAGGQ DDGPQGEGGQ NEGREAEGGQ SPSGGQGNGA 720
  721 GDLAQRQQAL RDELQRQRDG LPLGGPEGEA ARDSLDQAGR AMEGAEEALR EGDYAEAIDR 780
  781 QSEAMEALRD GMRALGEAMA EQQQQGQQPG GQQGQSTRQG NALDPLGRDR GGQGSDFFSR 840
  841 DSIGEGQAYR RAWDLLEEIR RRAGERERSE SERNYLQRLL DRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle