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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|99038481, gi|...
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNARNIAFW VVLFLLVVTL FNLFSGSGST LQSREKTYSE FVTAVEGGNV STVTLDGEQV  60
   61 RYTTSDGQSY TTIKPGDAEV TQMLIDNNIP VRAEKQQQST FQSFLLTLLP FLLLIGVWIY 120
  121 FMNRMQGGGK GGAMGFGKSK AKMLTEKHGR VTFDDVAGID EAKEELEEIV EFLRNPQKFS 180
  181 RLGGKIPKGA LLVGPPGTGK TLLARAIAGE AGVPFFTISG SDFVEMFVGV GASRVRDMFE 240
  241 QAKKNAPCIV FIDEIDAVGR HRGAGYGGGN DEREQTLNQL LVEMDGFEAN EGVIILAATN 300
  301 RKDVLDPALL RPGRFDRNVT VGNPDIKGRE KILGVHARKT PLGADVDLRI IARGTPGFSG 360
  361 ADLANLVNEA ALMAARVGRR FVTMEDFENA KDKVMMGAER RSMVLTADQK EKTAYHEAGH 420
  421 AVVGLKLPEC DPVYKATIIP RGGALGMVVS LPEMDRLNWH KDECEQKLAM TMAGKAAEII 480
  481 KYGPGHVSNG PAGDIQQASQ LARAMVLRWG MSDKVGNIDY AEAHEGYSGN TAGFSVSANT 540
  541 KELIEEEVRR FIEEAYQRAY QILEENKDEW ERLAQGLLEY ETLTGEEIKR VMNGEPPQAD 600
  601 DDADDDADTG ATSVTAIPKA KSKKTPPEGD MEPEPSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle